Originally Posted by
Infernally Clay
The idea that the clones would just turn on a dime, to use American parlance, and start shooting every Force-sensitive person within range is beggar's belief. It would never cross their minds that it was the explicit purpose of the clones to do just that and the clones themselves are in the same boat. They would die for the Jedi they serve. The idea that a chip can force them to kill those same Jedi is horrifying for the clones that learn about it, which is why there are whole arcs dedicated to some clones finding out about the chips and removing them.